Chorizo, Broccoli & Cheese Egg Muffin Cups

Egg Muffin Cups – a delightful morning surprise. While I sat down to write this post, the smell of something warm and savory came from the kitchen. Joanie had turned leftovers into a delicious breakfast: pork chorizo, cherry tomatoes, chopped broccoli, Cotija cheese and eggs. In no time the oven had produced a tasty, portable meal.

Egg Muffin Cups closeup

Egg muffin cups are incredibly simple and endlessly adaptable. Use whatever you have on hand: bacon, ham, sausage, or any favorite cheese. For vegetables, broccoli and asparagus work great. Essentially you’re making mini frittatas or quiches that bake in a muffin tin. They can be prepared ahead, served hot or cold, reheated in the microwave, and are perfect for breakfasts on the go or lunches for kids. Store them in the refrigerator or freeze for longer storage.

Egg Muffin Cups on plate

These muffins keep in the fridge for 3–5 days, so make a couple of batches and enjoy a healthy breakfast throughout the week. Frozen, they last 2–3 months and retain their texture if thawed and warmed—microwave for 30 seconds (blot any moisture first) or refresh them in a 350°F oven for 5–10 minutes.

Egg Muffins with Chorizo
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Ingredients

This version features pork chorizo, broccoli, cherry tomatoes and Cotija cheese. The chorizo crumbles and blends into the eggs as it cooks, giving the muffins rich Mexican-inspired flavor. If you prefer, swap chorizo for bacon or sausage and Cotija for cheddar or another favorite cheese—both work well.

Two plates of egg muffins

No flour is used in this recipe; the eggs and cheese bake into a satisfying, bread-like texture. These are keto- and low-carb-friendly. Top them with basil pesto, fresh tomato, salsa, or a dash of hot sauce if desired.

You can also make variations with mushrooms and ham. Cheddar in place of Cotija is a great substitute if Cotija is not available. If you want to try Cotija and can’t find it locally, many grocery services and retailers carry it.

Preparation Tips

Grease the muffin tin well and let the muffins cool briefly in the pan before inverting; they should pop out easily. Cooling a bit longer on a rack helps set them, but they’re lovely served hot straight from the oven.

Closeup low angle egg muffin
Recipe feature image

Pour the egg mixture evenly into the muffin cups and use a fork to distribute ingredients so each cup has a balanced mix. One halved cherry tomato per cup works well. These muffins are filling and protein-packed—about 2 g net carbs per muffin—so feel free to enjoy more than one.

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Full set two plates

Egg Muffin Cups – Chorizo, Broccoli, and Cheese – The Perfect “Grab-n-Go” Breakfast!

These perfectly sized muffins pair well with a morning beverage and require no knife or fork. They’re ideal for busy mornings and fit well into low-carb and keto diets. Enjoy!

Egg Muffin Cups – Chorizo, Broccoli, and Cheese

Egg Muffin Cups – Chorizo, Broccoli, and Cheese

Recipe by Joanie and Chris

5.0 from 22 votes

Breakfast muffins packed with nutrition and flavor — make ahead, low carb and delicious.

Course: BreakfastCuisine: American, MexicanDifficulty: Easy

Servings

12

Prep time

15 minutes

Cooking time

30 minutes

Calories

103.8 kcal

Net Carbs

1.4 g

Total time

45 minutes

Ingredients

  • 8 large Eggs

  • 6 ounces Pork chorizo, cooked and crumbled

  • 1/4 cup Heavy cream

  • 1 cup Broccoli, chopped

  • 1 cup Cotija cheese, crumbled

  • 1 Green onion, chopped

  • 12 Cherry tomatoes, sliced

  • 1/2 teaspoon Sea salt

  • 1/2 teaspoon Pepper

Instructions

  • Preheat oven to 350°F. Lightly grease a 12-cup muffin tin with butter.
  • Whisk the eggs in a medium bowl. Add the heavy cream, sea salt and pepper, and mix until combined.
  • Stir the cooked chorizo, chopped broccoli, crumbled Cotija and green onion into the egg mixture.
  • Pour the mixture evenly into 12 muffin cups. Stir gently to distribute ingredients, then add one sliced cherry tomato to each cup.
  • Bake 30 minutes, or until eggs are set and edges pull away from the cups. Cool 5 minutes, then invert the pan to release muffins.
  • Serve hot or cold. Top with salsa, pesto or hot sauce if desired.

Equipment

  • Muffin Tins
  • Measuring Cups
  • Mini-Chopper (optional)
  • Cooling Rack

Chef’s Notes

  • You can substitute bacon, sausage or any cheese (cheddar works well). Adjust vegetables and seasonings to taste.

Nutrition Facts (per muffin)

  • Calories: 103.8 kcal
  • Fat: 7.7 g
  • Saturated Fat: 3.9 g
  • Cholesterol: 140.7 mg
  • Sodium: 292.6 mg
  • Carbohydrates: 2.2 g
  • Fiber: 0.4 g
  • Sugar: 0.8 g
  • Protein: 6.5 g